21 May 05:40
Re: How to extract list of SNPs for a given gene?
From: Jason Stajich <jason <at> bioperl.org>
Subject: Re: How to extract list of SNPs for a given gene?
Newsgroups: gmane.comp.lang.perl.bio.general
Date: 2008-05-21 03:40:49 GMT
Subject: Re: How to extract list of SNPs for a given gene?
Newsgroups: gmane.comp.lang.perl.bio.general
Date: 2008-05-21 03:40:49 GMT
is this in humans? If so, You can do this in BioMart http:// www.biomart.org/ For humans go here: http://www.ensembl.org/biomart/martview/ -jason On May 20, 2008, at 2:20 PM, artendulkar <at> gmail.com wrote: > Hi, > Can anyone please tell me how to get list of SNPs in any particular > gene > using BioPerl, given NCBI Gene ID? > Is there any method, which takes NCBI gene ID as argument and > returns list > of SNPs by connecting to dbSNP? > Thank you. > Abhijit > _______________________________________________ > Bioperl-l mailing list > Bioperl-l <at> lists.open-bio.org > http://lists.open-bio.org/mailman/listinfo/bioperl-l
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