6 Feb 12:09
get a full taxonomy path from Bio::Taxon
Ross KK Leung <ross <at> cuhk.edu.hk>
2010-02-06 11:09:27 GMT
2010-02-06 11:09:27 GMT
In 2003, there's an old post asking about a way to get a full taxonomy. http://osdir.com/ml/lang.perl.bio.general/2003-08/msg00206.html Then Bio::Taxonomy is deprecated and now combination with Bio::Tree has to use in order to work out the story. In http://search.cpan.org/dist/bioperl/Bio/Taxon.pm it also gives an example by explicitly stating what to retrieve. However, what I need is to just provide a GI or accession number and to get a full taxonomy and I find there is no simple way (at least I don't know .) to do so. Would anybody advise? Thanks a lot, Ross
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