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Gmane
From: Antonio Nhani Jr <antonio.nhanijr <at> gmail.com>
Subject: Clustalw alignment parsing
Newsgroups: gmane.comp.lang.perl.bio.general
Date: Thursday 27th September 2012 08:39:41 UTC (over 4 years ago)
Hi All,

I need to parse a several seqs clustalw alignment file, searching for
regions to design primers (preference for not degenerated).
The amplified region must have base(s) differences, to identify each seq.
Haven't found a method in Bio::SimpleAlignIO to do this…

Any hint?

All the very best,

Antonio
 
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