30 Oct 2012 01:22
Re: Bio::DB::Fasta changes
Fields, Christopher J <cjfields <at> illinois.edu>
2012-10-30 00:22:33 GMT
2012-10-30 00:22:33 GMT
Thanks Florent, that helps tremendously. chris On Oct 29, 2012, at 6:25 PM, Florent Angly <florent.angly <at> gmail.com> wrote: > Hi all, > > I resolved the issue, i.e. restored the ability to return a list of IDs (or a single scalar one), added some documentation to make it explicit and added unit tests: > https://redmine.open-bio.org/issues/3389 > > Florent > > > On 29/10/12 20:38, Dave Howorth wrote: >> Florent Angly wrote: >>> I suspect that this bug report you cited unveiled a corner case that was >>> not covered by the tests. I'll assign the bug to myself and investigate. >> It looks to me like the previous code and documentation don't match. The >> CPAN docs, the git docs and the git code all appear to agree that there >> is a single scalar result. But the CPAN code implements an array result. >> >> >From the sound of it, people have been relying on an undocumented >> feature. But there was a specific change in the code behaviour. As Chris >> says, it seems like some discussion of the correct resolution would be >> sensible. >> >> Cheers, Dave >> _______________________________________________ >> Bioperl-l mailing list >> Bioperl-l <at> lists.open-bio.org >> http://lists.open-bio.org/mailman/listinfo/bioperl-l > > _______________________________________________ > Bioperl-l mailing list > Bioperl-l <at> lists.open-bio.org > http://lists.open-bio.org/mailman/listinfo/bioperl-l
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