On Dec 4, 2012, at 2:53 PM, Adam Sjøgren
> On Wed, 28 Nov 2012 02:27:16 -0800 (PST), Francesco wrote:
>> I'm experiencing that when I have to do a lot of accessess on a GFF
>> database (with Bio:DB::SeqFeature::Store) the slowness increase until
>> my script can stay running for more than a day.
> First you'll need to find out what/where exactly it is slow. One way to
> do so is using a a profiler; this is a good one for Perl:
> * https://metacpan.org/module/Devel::NYTProf
> If you want more specific suggestions, you'll probably have to provide
> more information.
> Good luck!
If anything, we need more profiling of Bioperl code. Ah, if we only had
infinite time... :)