17 Jan 2013 14:37
Re: drawing genome comparison cross linking tracks?
Fields, Christopher J <cjfields <at> illinois.edu>
2013-01-17 13:37:04 GMT
2013-01-17 13:37:04 GMT
Gbrowse_syn, SynBrowse, and others can do this, but there isn't a pre-packaged way of drawing this that I know of analogous to Biopython's. It would be nice to have, though. chris On Jan 17, 2013, at 5:45 AM, Adam Witney <awitney <at> sgul.ac.uk> wrote: > Hi, > > I would like to produces graphics as shown in this section (cross linking between genome tracks) [scroll down a little to see the pictures]: > > http://www.biopython.org/DIST/docs/tutorial/Tutorial.html#htoc211 > > but using perl. Can Bio::Graphics do this? I can only find Gbrowse_syn, but this works within a web browser, I would like to generate these diagrams from a stand alone script. If not does anyone know any perl libraries that can be used to show genome comparisons? > > Thanks > > Adam > _______________________________________________ > Bioperl-l mailing list > Bioperl-l <at> lists.open-bio.org > http://lists.open-bio.org/mailman/listinfo/bioperl-l
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