19 Jan 2013 17:12
Parsing Blast-Report extracting "Features flanking .."
jobu <buschj <at> hhu.de>
2013-01-19 16:12:54 GMT
2013-01-19 16:12:54 GMT
Dear List, I've got quite a lot of hits from blasting against nt-database that state: "Features flanking this part of subject sequence: " where the subject-accession only will give information about complete genomic sequences, the detailed information inside the "Features flanking" section of the HSP about annotations of upstream and downstream elements would be what I need. Is there any elegant way to make Bio::SearchIO do this job for me? greetings Jochen
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