14 Jan 2013 11:09
Parsing Blast results for different genus
Afonso Duarte <afonsomduarte <at> gmail.com>
2013-01-14 10:09:48 GMT
2013-01-14 10:09:48 GMT
Dear All, I have obtained several .gb BLAST results that I want to split in different .gb or .fasta files accordingly to genus. I searched for different ways to do it in the web, but didn't find a way to do it when one has something like 50 genus in the blast. (to do it for a short number or genus I could use splitgb.pl from http://www.bioperl.org/wiki/HOWTO:SeqIO but it will not be feasible for a large number of genus). Is there a script of way to do it in a efficient way ? Best PS sorry if this message appears twice ... as i was having some trouble posting the first time.
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