On 25 February 2013 10:32, Andreas Leimbach
> On 25.2.13 11:08, Carnė Draug wrote:
>> I'm writing a perl module to write a description of the variance
>> between 2 sequences as described on
>> Basically, given 2 sequences, would returns something like "p.Lys2del
>> p.His25_Met26insGln" if those are the differences. It also accounts
>> for the existence of - characters on the sequences that may come from
>> their alignment.
>> My question is, where on the project tree should I place the module?
>> Also, is there something already written that would convert from 1 to
>> 3 letter code?
> for your last question:
> You can convert aa strings from one to three letter code with
Thank you. I have never used Bio::SeqUtils. Not only does solve my
problem, but also seems to be the right place to insert my code.
If no one objects, I'll add a new method to Bio::SeqUtils named
Bioperl-l mailing list