7 Mar 2013 17:01
Re: Failed ./Build test while installing Bioperl-1.6.901 (continued)
Scott Cain <scott <at> scottcain.net>
2013-03-07 16:01:37 GMT
2013-03-07 16:01:37 GMT
Hi Ah Jung, The first problem you reported was because you didn't download the whole tar file (the were a warning message that it was truncated, and then messages that there were files missing); you just needed to download it again. For this message, you have this the first time cpan tries to install a module: !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ERROR: Can't create '/Library/Perl/5.12/darwin-thread-multi-2level' Do not have write permissions on '/Library/Perl/5.12/darwin-thread-multi-2level' !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! When running cpan, you need to either run it as root (ie, "sudo cpan") or configure it to use a local directory where you do have write permission. The former is probably easier, whereas the latter is probably better. Scott On Thu, Mar 7, 2013 at 1:15 AM, Jeon Ah Jung <a0071251 <at> nus.edu.sg> wrote: > > > Dear BioPerl, > > I have emailed earlier regarding failed tests while installing Bioperl by downloading .tar file directly. > Shortly after i tried 'cpan install Bio::Perl' instead, and i am attaching the error messages i received for your information. > Hope this helps to clarify the problem further. > > Thank you, > Ah Jung > > > _______________________________________________ > Bioperl-l mailing list > Bioperl-l <at> lists.open-bio.org > http://lists.open-bio.org/mailman/listinfo/bioperl-l -- -- ------------------------------------------------------------------------ Scott Cain, Ph. D. scott at scottcain dot net GMOD Coordinator (http://gmod.org/) 216-392-3087 Ontario Institute for Cancer Research
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