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Gmane
From: Brian Foley <brianfoleynm <at> gmail.com>
Subject: Re: Annotation-assisted (and/or BLAST assisted) multiple sequence alignment tool?
Newsgroups: gmane.comp.lang.perl.bio.general
Date: Saturday 20th April 2013 22:36:46 UTC (over 3 years ago)
>From another group, I got an answer.  The MAUVE genome alignment software 
is supposed to solve this problem.
http://gel.ahabs.wisc.edu/mauve/<https://mymail.lanl.gov/owa/redir.aspx?C=5MxmGridb0ak3GxBPlpBrluXIodTEdAI9j8xfa_Xby8mfUgaFDgvWrOafUfQzPWBp5UkseJs_kU.&URL=mailto%3aweihuamian%40gmail.com>
I have not yet downloaded it and tested it, but it does seem to be the 
right tool for the job.
 
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