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Gmane
From: cacaucenturion2 <cacaucenturion2 <at> gmail.com>
Subject: How to get all protein sequences from one species?
Newsgroups: gmane.comp.lang.perl.bio.general
Date: Friday 13th September 2013 08:29:26 UTC (over 3 years ago)
Hi all,

I have tried use Bio::DB::GenBank. But it does not seem to work very well
since for some species I could not get complete protein sequences. How
could I download protein sequences of one species using BioPerl? Any help
is appreciated!

Best,
Cacau


$query = Bio::DB::Query::GenBank->new(
-query   => $organism_name."[ORGN]",
-db      => 'protein'
);
 
CD: 4ms