cacaucenturion2 | 13 Sep 10:29 2013
Picon

How to get all protein sequences from one species?

Hi all,

I have tried use Bio::DB::GenBank. But it does not seem to work very well since for some species I could not
get complete protein sequences. How could I download protein sequences of one species using BioPerl? Any
help is appreciated!

Best,
Cacau

$query = Bio::DB::Query::GenBank->new(
-query   => $organism_name."[ORGN]",
-db      => 'protein'
);

_______________________________________________
Bioperl-l mailing list
Bioperl-l <at> lists.open-bio.org
http://lists.open-bio.org/mailman/listinfo/bioperl-l

Gmane