On Oct 5, 2013, at 9:33 AM, "Fields, Christopher J"
> On Oct 5, 2013, at 4:50 AM, Peter Cock wrote:
>> On Wed, Sep 25, 2013 at 11:07 PM, Danyu Wu wrote:
>>> I can not get the seq from a genbank format entry using
>>> bioperl when both CONTIG and ORIGIN are present. Any
>>> help is greatly appreciated!
>> See point  in this NCBI RefSeq announcement:
>> Scott Markel raised this potential issue in July,
>> I'd fixed this in Biopython but it sounds like BioPerl may
>> still need updating.
> It was never submitted as a bug, now corrected. I'll try to follow up on
it this weekend.
Appears to be fixed now in github master branch; I found a second bug
introduced on master prior to this, so I would pull the latest. I will
likely try to post a new v1.6 CPAN release in the next week.