GM won't save my changes

System = Ubuntu 10.04, Firefox 10.0, Greasemonkey 0.9.15

I haven't written any scripts for quite sometime and I see that 
Greasemonkey has changed a lot. I've read through the manual and still 
can't figure out what is happening.

What I want to do requires jQuery.  At first, after GM installed the 
script, I simply put a local copy of jQuery in that folder.  Doing some 
research I found that most authors @required a copy from the web. So I 
changed my script in its working directory and used Tools-->Addons to 
delete the original script and then reinstalled it.

A look in the folder GM created showed that the jQurey file reappeared 
and renaming it proved that the script depended on it despite the 
@require pointing to the web.  I tried manually deleting that folder 
before uninstalling the script but it was recreated with the jQuery file 
intact.  Also when reinstalling the script I noticed that (1), (2), (3) 
etc appeared on the install button.

I noticed other changes not being reflected in the config.xml file 
either, but if someone could please point me to the correct place in the 
docs or tell me what I am doing wrong, those problems would probably go 
away too.

Thanks,  Jim

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