10 Feb 2005 17:04
Re: [BioPython] writing down a string in fasta format
Jonathan Taylor <jonathan.taylor <at> utoronto.ca>
2005-02-10 16:04:21 GMT
2005-02-10 16:04:21 GMT
I believe you need to use Bio.SeqRecord as the input. There really should be some docstrings in Bio.SeqIO.FASTA.FastaWriter though. Cheers. Jon. Edoardo Saccenti wrote: > Dear all, > I'hava a string of length L>>60 and I want write it down in Fasta format > I try to use FASTA.FastaWriter from BioSeq.IO but it does accept accept a > string as input. > > Any Idea?? > > thanks > Edoardo > -- > "Raffiniert ist der Herr Gott, > aber boshaft ist Er nicht." > > --- > Dr. Edoardo Saccenti > FiorGen Pharmacogenomics Foundation > CERM Nuclear Magnetic Resonace Research Center > Scientific Pole - University of Florence > Via Luigi Sacconi n° 6 > 50019 Sesto Fiorentino (FI) > tel: +39 055 4574193 > fax: +39 055 4574253 > saccenti <at> cerm.unifi.it > www.cerm.unifi.it > > _______________________________________________ > BioPython mailing list - BioPython <at> biopython.org > http://biopython.org/mailman/listinfo/biopython > _______________________________________________ BioPython mailing list - BioPython <at> biopython.org http://biopython.org/mailman/listinfo/biopython
RSS Feed