Scott Cain | 1 Apr 2010 17:44
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Re: Representing multiple organisms from the same species in CHADO - best way?

Hi Leighton,

I just wanted to let you know that I fixed this organism behavior in
svn (the gbrowse-adaptors/Chado directory).  I've got a few more fixes
to address, and then I'll make a 0.24 release.  If you wanted to try
it from svn, see

  http://gmod.org/wiki/SVN

for hints on getting a checkout.

Scott

On Mon, Mar 22, 2010 at 4:44 AM, Leighton Pritchard <lpritc <at> scri.ac.uk> wrote:
> Hi,
>
> On 19/03/2010 Friday, March 19, 16:28, "Scott Cain" <scott <at> scottcain.net>
> wrote:
>
>> Then don't do that! :-)
>
> I can't help myself - I have a compulsion to break things... ;)
>
> Seriously though, I only noticed it because I initially used the organism
> abbreviation, rather than common name.  The problem occurs with typos, too.
>
>> I agree it's a bug; I suppose what it ought to do when given an
>> invalid organism is throw a 500 error and go no further.  Do you
>> agree?
>
> I agree that it should halt immediately.  A 500 response covers
> configuration errors, doesn't it?  If that's the case, it looks likt the
> appropriate error, to me.
>
> Cheers,
>
> L.
>
> --
> Dr Leighton Pritchard MRSC
> D131, Plant Pathology Programme, SCRI
> Errol Road, Invergowrie, Perth and Kinross, Scotland, DD2 5DA
> e:lpritc <at> scri.ac.uk       w:http://www.scri.ac.uk/staff/leightonpritchard
> gpg/pgp: 0xFEFC205C       tel:+44(0)1382 562731 x2405
>
>
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--

-- 
------------------------------------------------------------------------
Scott Cain, Ph. D.                                   scott at scottcain dot net
GMOD Coordinator (http://gmod.org/)                     216-392-3087
Ontario Institute for Cancer Research

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