6 Mar 2013 12:17
Fwd: problem with reading gpr files
> > (Posting it a second time ..) > Hi > I am new to analyzing gpr files and I am getting an error in the first stage of reading them. > Here is the code: > >> library(marray) >> myfiles <- dir(pattern="gpr") >> data<-read.GenePix(myfiles) > where I get the error >> Error in `[.data.frame`(dat, , name.Rf) : undefined columns selected > > > I have also tried >> library(limma) >> myfiles <- dir(pattern="gpr") >> RG <- read.maimages(myfiles, source="genepix") > Where also I get the error >> Error in `[.data.frame`(obj, , columns[[a]]) : undefined columns selected > > > I tried to look for solution but couldn't find any except that the 'gpr files should be used as obtained from genepix'. > I have only these files, is there any way to fix the files or find the cause of error. > > Thanks > Konika Chawla > PhD Student > Department of Biology > NTNU > > > > Konika Chawla PhD Student Department of Biology NTNU [[alternative HTML version deleted]] _______________________________________________ Bioconductor mailing list Bioconductor@... https://stat.ethz.ch/mailman/listinfo/bioconductor Search the archives: http://news.gmane.org/gmane.science.biology.informatics.conductor
RSS Feed