7 Mar 2013 10:29
Annotation problem with Microarray Gene Rat ST 1.0
Dear Members,
I imported the CEL files with the ReadAffy() command. Using head() I got
following error term:
In x[seq_len(n)] :
The use of abatch[i,] and abatch[i] is deprecated. Please use abatch[,i]
instead.
Using the command : mm(celfiles,'10700055')[1:3,]
gives the NA in Mismatch data.
ControlW_D3.CEL ED_01_Kd5_09_10_28.CEL ED_02_Kd14_02_03_04.CEL
107000551 NA NA NA
107000552 NA NA NA
107000553 NA NA NA
Is there any coincidence between these two commands. How can I convert the
abatch[i] format into the abatch[,i] format.
Thanks for your attention
Mrs: Kammermeier
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